There is no doubt that this mod decreases the ultimate strength of the seat anchorage in a collision scenario. If you don't think so, you are deluding yourself. Was the original design overdone? I don't think so, auto engineers are not known for overkill. A 10mm bolt doesn't cost much more than an 8, until you have to buy many thousands of them. So the unchanged rear bolts are unlikely to be adequate on their own.
The lack of intermediate support or angle of the runner has nothing to do with it either way, all stress is transmitted horizontally through the bolts in a collision. Yes the problem is bending. The bolt was originally in shear, it is not intended to resist bending in any way. Any joint where the fastener is in bending is a poorly designed joint. To correctly raise the seat so that it is connected with OEM strength would entail building up a platform on the floor so that the bolt stays in pure shear.
I'm not saying don't do this mod. If it saves you serious back pain, I can see one would consider the reduction in safety for an unlikely event worth the diminished daily pain. But do not rationalise there are no consequences of this mod. You are trading safety for comfort. That is a fact.